MeanWalker

metropoliswalker.h

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00001 /*
00002 
00003   This file is a part of MeanWalker, a library which provides utilities to
00004   sample from probability distributions using methods like the 
00005   Metropilis-Hastings algorithm and Goodman-Weare algorithm.
00006 
00007   Copyright (C) 2012 Jori Liesenborgs
00008 
00009   Contact: jori.liesenborgs@gmail.com
00010   
00011   This program is free software; you can redistribute it and/or modify
00012   it under the terms of the GNU General Public License as published by
00013   the Free Software Foundation; either version 2 of the License, or
00014   (at your option) any later version.
00015   
00016   This program is distributed in the hope that it will be useful,
00017   but WITHOUT ANY WARRANTY; without even the implied warranty of
00018   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
00019   GNU General Public License for more details.
00020   
00021   You should have received a copy of the GNU General Public License
00022   along with this program; if not, write to the Free Software
00023   Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
00024   
00025 */
00026 
00031 #ifndef MEANWALKER_METROPOLISWALKER_H
00032 
00033 #define MEANWALKER_METROPOLISWALKER_H
00034 
00035 #include "meanwalkerconfig.h"
00036 #include "walker.h"
00037 #include <errut/errorbase.h>
00038 #include <vector>
00039 
00040 namespace meanwalker
00041 {
00042 
00043 class RandomNumberGenerator;
00044 
00055 class MEANWALKER_IMPORTEXPORT MetropolisWalker : public Walker
00056 {
00057 public:
00059         MetropolisWalker(RandomNumberGenerator *pRndGen);
00060         ~MetropolisWalker();
00061 
00075         bool init(Function *pProbFunction, const double *pMinCoords, const double *pMaxCoords, const double *pStartCoords, 
00076                   bool keepInside = true);
00077 
00079         void setNewStartCoordinates(double *pStartCoords);
00080 
00081         void walk(size_t numSteps);
00082         const double *getBestCoordinates() const                                                        { return &(m_bestCoords[0]); }
00083 protected:
00087         virtual void stepToNewCoords(const double *pCurCoords, double *pNewCoords);
00088 private:
00089         std::vector<double> m_minCoords, m_maxCoords;
00090         std::vector<double> m_coords, m_tryCoords;
00091         std::vector<double> m_stepScale;
00092         std::vector<double> m_bestCoords;
00093         bool m_keepInside;
00094 };
00095 
00096 } // end namespace   
00097 
00098 #endif // MEANWALKER_METROPOLISWALKER_H